Resources

Resource Summary

HPC4Research (BIH Cluster in the Research Network)

• General purpose nodes
  • ca. 200 nodes (different generations), 16 cores/32 threads, 128-192 GB RAM each
  • InfiniBand interconnect for 32 of these
  • additional 32 nodes contributed by power users
• 4 high-Memory nodes
  • 2 nodes with 0.5 TB RAM
  • 2 nodes with 1.0 TB RAM
  • featuring 80 cores each
• 5 GPU node
  • 4 nodes with 4 V100 cards each
  • old K20m node
• 2 PB fast GPFS/Spectrum-scale storage
  • DDN hardware with native client access; 16x10 Gb/s ethernet
• Scheduling
  • slurm
  • some SGE (will be retired soon)
• Authenitfication with Charite or MDC account

HPC4Clinic (within Charite network)

• 24 compute nodes with 48 cores and 384 GB each
• 3 GPU nodes with 4 V100 cards each
• 1.2 TB scale-out storage (Isilon)
• Scheduler slurm
• Authenitfication with Charite account
• Currently test operation

Other Resources

• For incoming omics data: file server 0.5 PB; Dell hardware with ZFS
• For secure file exchange with external partners: DMZ server